Package: mixhvg 1.0.1

mixhvg: Mixture of Multiple Highly Variable Feature Selection Methods

Highly variable gene selection methods, including popular public available methods, and also the mixture of multiple highly variable gene selection methods, <https://github.com/RuzhangZhao/mixhvg>. Reference: <doi:10.1101/2024.08.25.608519>.

Authors:Ruzhang Zhao [aut, cre], Hongkai Ji [aut]

mixhvg_1.0.1.tar.gz
mixhvg_1.0.1.zip(r-4.7)mixhvg_1.0.1.zip(r-4.6)mixhvg_1.0.1.zip(r-4.5)
mixhvg_1.0.1.tgz(r-4.6-any)mixhvg_1.0.1.tgz(r-4.5-any)
mixhvg_1.0.1.tar.gz(r-4.7-any)mixhvg_1.0.1.tar.gz(r-4.6-any)
mixhvg_1.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
mixhvg/json (API)

# Install 'mixhvg' in R:
install.packages('mixhvg', repos = c('https://ruzhangzhao.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/ruzhangzhao/mixhvg/issues

On CRAN:

Conda:

rna-seq-analysisrna-seq-pipelinesingle-cellsingle-cell-rna-seqvariable-selection

4.02 score 7 stars 8 scripts 210 downloads 1 exports 175 dependencies

Last updated from:b0b1210838. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK369
source / vignettesOK322
linux-release-x86_64OK404
macos-release-arm64OK448
macos-oldrel-arm64OK394
windows-develOK282
windows-releaseOK363
windows-oldrelOK288
wasm-releaseOK178

Exports:FindVariableFeaturesMix

Dependencies:abindaskpassassortheadbase64encbeachmatBHBiobaseBiocGenericsBiocNeighborsBiocParallelBiocSingularbitopsblusterbslibcachemcaToolscliclustercodetoolscommonmarkcowplotcpp11crosstalkcurldata.tableDelayedArraydeldirdigestdotCall64dplyrdqrngedgeRevaluatefarverfastDummiesfastmapfitdistrplusFNNfontawesomeformatRfsfutile.loggerfutile.optionsfuturefuture.applygenericsGenomicRangesggplot2ggrepelggridgesglobalsgluegoftestgplotsgridExtragtablegtoolsherehighrhtmltoolshtmlwidgetshttpuvhttricaigraphIRangesirlbaisobandjquerylibjsonliteKernSmoothknitrlabelinglambda.rlaterlatticelazyevallifecyclelimmalistenvlmtestlocfitmagrittrMASSMatrixMatrixGenericsmatrixStatsmemoisemetapodmimeminiUInlmeopensslotelparallellypatchworkpbapplypillarpkgconfigplotlyplyrpngpolyclipprogressrpromisespurrrR6RANNrappdirsRColorBrewerRcppRcppAnnoyRcppArmadilloRcppEigenRcppHNSWRcppProgressRcppTOMLreshape2reticulaterlangrmarkdownROCRrprojrootRSpectrarsvdRtsneS4ArraysS4VectorsS7sassScaledMatrixscalesscattermorescransctransformscuttleSeqinfoSeuratSeuratObjectshinySingleCellExperimentsitmosnowsourcetoolsspspamSparseArrayspatstat.dataspatstat.explorespatstat.geomspatstat.randomspatstat.sparsespatstat.univarspatstat.utilsstatmodstringistringrSummarizedExperimentsurvivalsystensortibbletidyrtidyselecttinytexutf8uwotvctrsviridisLitewithrxfunxtableXVectoryamlzoo

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